rs29062272 SNP Detail

Summary

• ID
  rs29062272
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:55569922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGAGTCT GTTACACTGC
  ACATTGTCCT CTTGTAGGCC TCTGTGTTGG TTCCTGTCTG CTGCAAGGAG AGATTTCTTT
  GAAGCTTCTC CAGTTGTATG ATTAGAATAA CCTGAAACTT CCTCCAGAGA GAGGGCTTTT
  GCAACAAGCA AGGTTTTCTA TATAATCACT TTTAACTCAA ACTAAAACAT CTCAGCAGAC
  S
  CCATCTTTCA TCTGTAATAT TGCTGGGTTC ATAAGAACTG TATTAGTATC TGCATAGGCA
  TTCAGAACAC ATACCCACCC ACTGGCATCC TTGGCCAGAA AGTCTGTTAC CGAGCAACAC
  ACAGATTCCC CCACATCCAC TTCTATTACG TTTGTAAGAA ATACTCAAGT ATTCTTATAT
  TCTCTTCAGA ATACGGAAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss38389754	NES09718327	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29062272					SNP	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38389754	NES09718327	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:55569922 () rs orientation: forward

Symbol	Name	Function Class
Gm10477	predicted gene 10477	within coordinates
Gm62070	predicted gene, 62070	within coordinates