rs29069705 SNP Detail

Summary

• ID
  rs29069705
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84092792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAAGGGTT TGAGATTTTC TATGTACTGT TATTATTTGT
  AGTATTATTA TTAATGTGCT TATTGGGTTT TTGAGGTTCA GTGTGGAGTC ATTTCAGAGT
  R
  CGTTCTCTGT TCTCCGGGTG TCTGCTAAGT CCTTAAGCAA AGTTTGTGAT TCTTAATCTG
  ATCACAATGG AAAGGGCAAG ACACTGCTTA TCTCACTTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38395727	NES09678030	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	G	A	G	G	G		G	G	G	G		G
ss134233995	ENSMUSSNP5315078	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss325902980	CHEV_X_82294525	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29069705					SNP	A	A	A	A	A	G	A	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38395727	NES09678030	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84092792 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	763 bp distal
Rr692262	regulatory region 692262	153 bp distal
Tssr161429	transcription start site region 161429	879 bp downstream
Tssr161430	transcription start site region 161430	853 bp downstream