rs29069707 SNP Detail

Summary

• ID
  rs29069707
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84092495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTGGCTG CTGGGACGGC
  TCGGAGAGCT AAAGCGGATT TCTCGCTTTG CCCAGAGAGG GACAGCTGGT TTCCTCCTGC
  GGGGATCGGG CCCGGGGAGC TTTTTGCTCC TTTGTGGGGC TCCCAGTTTG GACAGGAACC
  AGGCGGACTG TTCCCCGAAA CCGTCATTGG ACCTGGCAGG AAAAAGGGGC GCACGCACGC
  R
  GTTCTACCTT GCATTGCACT GCTAAGTGCC AAAAGGTCAA CTTTCTGCCT GATTTCTTCC
  GAGGATTCCA ACTGACATTT CCCTCCCTGT GTTTTCTCCT GTGCTTATTC CATGCTGCAG
  GACTTGGAGA AATAGAGAAA ACACGGGCAA TTAAAGCCTA GAAAGTCAAG GAATTGACTG
  AGAAAAGAAA GGGGGGCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38395729	NES09678028	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29069707					SNP	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38395729	NES09678028	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84092495 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	466 bp distal
Rr692262	regulatory region 692262	within coordinates
Tssr161429	transcription start site region 161429	582 bp downstream
Tssr161430	transcription start site region 161430	556 bp downstream