rs29069710 SNP Detail

Summary

• ID
  rs29069710
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84090525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCTCACTA GCTCAGAACT GCTAAAGCAT TACAAGCACC
  AGACTGAGTC GCTGAAGAGA AATGCCAAAA AATGACATCT TTGCTTTAAA ATAGCAACGC
  W
  AGGCTTACCT ACAGGCACAT ATCTTTAGTG GTAACGTTTG CATTTTTATT TGGTTTGTCA
  AAAGTAATGA AGAAGCCGCC AAGTCCCCTT TTACTTTCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss38395732	NES09678101	PERLEGEN	MM_PANEL2	f	SNP	T			T	T	A	T			A	A		A	A		A
ss46481096	mCV22789609	ABI	CRAMUS_MOUSE	f	SNP		T	T					A	T
ss134233980	ENSMUSSNP5826691	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						T
ss325902975	CHEV_X_82292258	CHEVERUD	SCREENING_POP	f	SNP												T			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29069710					SNP	T	T	T	T	T	A	T	A	T	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38395732	NES09678101	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84090525 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	1021 bp proximal
Rr692262	regulatory region 692262	1505 bp proximal
Tssr161429	transcription start site region 161429	1365 bp upstream
Tssr161430	transcription start site region 161430	1390 bp upstream