rs29085112 SNP Detail

Summary

• ID
  rs29085112
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:95204058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGTGCTA TATAGAGTGC
  TGGAATTAGG ACGAGTGCAG TGGTAAGGAA GCTTTGGAAG GTTCCTGGCT TGCTTAGGGA
  GTGGAATCAT CCCAGGACAA GGGACTTGTG AATTGGAAGG GAGGACACCC CAGATATTCA
  GTCTCAGCAC AGAAACAGGC ATCAGAAATC TTGGATTTCA GAGGTTGTAA GAGGGAGGAG
  M
  CTTTCATAGT TTCCTGTTGT CAATGACTCT CGTGCCATTA CTGTGCCAGG TACATTATGG
  GTTGCTATTG GTTAACTGGC AAGTAGTATG GTAGTAGCTG AAGAGTCTGT ACACAGTTGT
  ACTTGGGTTG AGCAGAAACA AGCAGAGCCC TCAGAATTTC CCCTACAATG CCCTTAGTGT
  ATTCAGTGTA ATCTGAAGGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss38415425	NES09670938	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29085112					SNP	C	C	C	C	C	C	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38415425	NES09670938	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95204058 () rs orientation: forward

Symbol	Name	Function Class
Msn	moesin	within coordinates
Tssr161521	transcription start site region 161521	315 bp downstream
Tssr161522	transcription start site region 161522	270 bp downstream