rs29085773 SNP Detail

Summary

• ID
  rs29085773
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:95922973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGTGAAT ACCATATAAA
  TTCATGTTCC TGGGGGGGGG TCAGAGGCAT AGGTAATCTC TGTACTGAAT TACGTTAGTA
  CTGAGAACTG GACTCTGGTG CTCCACAAGA GCAACAATCA CTCTTAAACA CCTTGTCATA
  TTTCCATACT GGAATAGGCT TATTTTCTAA GTATCTACTC TGGAGCAAAT GCAGGGTTAA
  R
  GGTGAAGATA AGTGGGTAAT AAAGGCCAGG TGACAATCTC CATAAAGACA AACAACCCAA
  TCAAAAAATG GGTAATAGAA TTAAACAGAG ATTTCACAAC AGAGGAATCT CAAAGGGCTG
  AGAAGCACTT AAAGAAATGT TCAAAGTCTT TAGCAATCAG GAAAATTCAA ACCGAAACAA
  TCTTGAGATT CCACCTTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
ss38414945	NES09663942	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
rs29085773					SNP	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38414945	NES09663942	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95922973 () rs orientation: forward

Symbol	Name	Function Class
Rr5037	regulatory region 5037	173 bp distal
Rr8052	regulatory region 8052	385 bp distal