rs29094494 SNP Detail

Summary

• ID
  rs29094494
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105252193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTACTACG TTTCTAAGAT
  AAAACTTATG AAGACTTAGG CTATTGAGTC CGCCATATGG GCCCAAACAC ACAAAAATGT
  TAATGTATGC AGAACAGACT TTATTCCTTA CATGGTGTCA TTGTCATCGT CGTCATCATG
  CTTCCTCTTC AGTGGGTTTG AGTCGGTGGC TGTGTTCTGT GAGGAAACCA TGCTGGTGGT
  R
  ATGAGAATAT TTTTGGGCCC AATCATTGAA GGATTAATCA GAACATTTTG GACTGCAGTT
  GCTGCAGGAG CTGTAAACAG AAGAGAACCC CCACACCCAG ATATGAATTA CCCAGGAATA
  AATGTAGACA ACATAGAGAA TGTAATTTTA GACAAGTTTC AATAGCACAG CACATAACTA
  CATCATAGAA GAAACAAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss38423406	NES09801626	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29094494					SNP	A	A	A	A	A	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38423406	NES09801626	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105252193 () rs orientation: forward

Symbol	Name	Function Class
Taf9b	TATA-box binding protein associated factor 9B	within coordinates
Tssr164020	transcription start site region 164020	478 bp upstream