rs29094497 SNP Detail

Summary

• ID
  rs29094497
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:105251947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTCCTAA ATTGAGAGAT
  TTGGTCAAAA AGTGACAATG TGAATAGTTC ACTATCAAAA GAAAGTCCTG TTAAATGTAA
  ATGAGACCAG GAGCTGAAGT CCAAGCGCTG CTGCTAGTGA CACATATCGG AAAACTGCTT
  CTAAAAACAG AGTTGCCATG GTGAGACTCA ACATTAATGA AGCTGTCTAG AAGCAAGTAC
  K
  TGTACTGTAA CAAAACCTTC CAGATGTAAC TAATGTGAAA AATATTACTA CTACGTTTCT
  AAGATAAAAC TTATGAAGAC TTAGGCTATT GAGTCCGCCA TATGGGCCCA AACACACAAA
  AATGTTAATG TATGCAGAAC AGACTTTATT CCTTACATGG TGTCATTGTC ATCGTCGTCA
  TCATGCTTCC TCTTCAGTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss38423409	NES09801623	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs29094497					SNP	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38423409	NES09801623	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105251947 () rs orientation: forward

Symbol	Name	Function Class
Taf9b	TATA-box binding protein associated factor 9B	mRNA-UTR
Tssr164020	transcription start site region 164020	232 bp upstream