rs29094720 SNP Detail

Summary

• ID
  rs29094720
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105250225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAATATTTC CACCTAATCC
  CCATGTTATA AATGAGGAAT TCAAATTTTG ATGTGTGTGT GTGTGTGTGG AATGACAAGA
  ATTTTACAAT ACTGTTTGAC CTAGCTCCAA ACTCACGATC CTGATGCAGC CAGACGCCCC
  CCCCCCCACC TCCAGTGCTC ATTGTTTCCT GCTTTTTCCT ACCTCATGGG ATACATGCTT
  R
  TATGTAATCA AAAAGGGTAT CTAAGACAAG GGACCATCTT AGTTGTCTCC TGGCTTCCCT
  CCCCAAAAGC AACCAGAGCT CTATACATGT ACAAATTCCC ACTATCTTAA GTTTGTAAGA
  CATAATGCCA TATTCTTTTT CTTTACCATG ACTCAAATGC TAATTCCCAG CAAAACCATG
  CTGCCAGCAT CATGAATTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss38423422	NES09801666	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs29094720					SNP	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38423422	NES09801666	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105250225 () rs orientation: forward

Symbol	Name	Function Class
Taf9b	TATA-box binding protein associated factor 9B	264 bp downstream
Tssr164020	transcription start site region 164020	1468 bp downstream