rs29102658 SNP Detail

Summary

• ID
  rs29102658
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:110301530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGCAAGA AAAGAAGAGA
  GCTATAGAAA ATTGTTAGAC AGTTAGACCC TAAGATGCAA AGGTTTGTAT ATATAGCTAA
  AACACAAAGG GGAAGTTGTG TGTTAGTTAA TCGACTCAAT AAGCAAAGGT TTTTTGCATT
  ATATAATGAT GTCAGTAAAG TATAAATTCA ATGTAAGCAA TCACTGTTAT GATAATGGCT
  Y
  AGGCATCAGA AGTCTTCATC AAATTATCTA TGAATATTTG ATTGTTTCTA TAATGAAACT
  GTGATAGAAT ATAACTTCAT AGTAACATAT TACAAATTAA AAATACCAAA TCATGTATGT
  AATACTTTGA GTAAACTATC CTTACCACTT TTAGGATAGC AAGTAAATTC TCAACAAGAA
  TTTTCCTAAG CTGGGCATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	PWD/PhJ
ss38429752	NES09804187	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	PWD/PhJ
rs29102658					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38429752	NES09804187	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:110301530 () rs orientation: forward

Symbol	Name	Function Class
Rps6ka6	ribosomal protein S6 kinase polypeptide 6	Intron