rs29102660 SNP Detail

Summary

• ID
  rs29102660
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:110301141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATAGAGA ATTTAGATTG
  CTTCAAAATA TGAAAGCATC AATAATTTTA TAATGTTCCG TTTTATCAAC ACTTAGGAAA
  AACAGTATTT ATATTCTGTA CAGTTAACTG AATATATAAA GAACCACAAA ATCCTTTTAA
  AAGACACAAA TTTGAAAGGC AGAAGATGGA GGGGAAAGGG AGGAGCAAGA GTGATACAGA
  Y
  GCTCGTGGAT GAAACTCAGA CAGAAATAAA AAGATAATCT TCAGACAGAT TTTTCATTCT
  ATAGTACTTT TTATTTTTTG TTCATCACTA TGTACCAAAC TTTCAGAACT GGGATTTTGT
  TAGTAATGAA AGAGGTGGGA GGGGGGGACG ACACTTAAGG TAGCAGGAGT TTGCCTGTAG
  TGTTTTAAAT GGGCAAGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ
ss38429754	NES09804185	PERLEGEN	MM_PANEL2	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ
rs29102660					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38429754	NES09804185	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:110301141 () rs orientation: forward

Symbol	Name	Function Class
Rps6ka6	ribosomal protein S6 kinase polypeptide 6	within coordinates