rs29104351 SNP Detail

Summary

• ID
  rs29104351
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:110283563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAGTAGG GAGAAAAACT
  GAGAGATCTG AAGAGGACAG AGATTCCTCA GGAAGACCAA CAGACTCAAC TAATGGGGAC
  CCTTGGGGCT CTCAGATATT GAACCACCAA ACAAAGAAGG GAGAAGCATG GACTGGACCT
  AGGCCTCTAT TGTATGCATA CAGTGTTACC CATCTCTTTC TCTCTCCCTC TCTCCCTTTT
  W
  CCCTTTCTCT CTCTCTTCAG TGAATTCTTT TCAGTTTCCC TCCAGAATTC TTCTTTGGTC
  CATAAATTGT TTATCTTTAA ATTAAAAGTA GTTTTTAACT GGCATATAAA ATTGTATTTT
  TGAGCTATCA TTTATTGCTT CAATCGTTTA TGTATTATGT AATGTTTAAA TCAAGATATA
  TCAATAATTT CACTTATCTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38429795	NES09804414	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29104351					SNP	A	A	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38429795	NES09804414	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:110283563 () rs orientation: forward

Symbol	Name	Function Class
Rr2611	regulatory region 2611	238 bp proximal