rs29104766 SNP Detail

Summary

• ID
  rs29104766
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:110282543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTATGTA TGAAAGCTTG
  CATGAATACT TGTGAAGTTG ATTGTGACAG ATGGTCGGGG CCAGGACAGA ATGTGGGTAT
  ATAAATGTTT GAATGTGTAT GTGTTTATGC ACATTGGCCT GTATACAGCA TCTTAATTCT
  TTTCCTTTCC TCCCTCTGGT TCACAAAGAG TTAGCCGGTT TACCCAGAGA GGTTTCTGGC
  Y
  GATTCATCAG AGAAAGGAGC ACCAGCAATA AATCTTTTCA CTTTATCCCC TGCAGTTTTA
  TGATGAGGTG CTAAATAGTT TCTGCCTCAG AGGAACTCAG ATAGGCAGGT TAGCTACTGC
  AGCTATGCAA CTTAGACTTA AGATAGGAAA ACGTTTTATT ATTATACAAC AACCCTAAAT
  ACCTCATAGG ACCAAGTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38429800	NES09804407	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29104766					SNP	C	C	C	C	C	C	T	C	C	C	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38429800	NES09804407	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:110282543 () rs orientation: forward

Symbol	Name	Function Class
Rr2611	regulatory region 2611	1258 bp proximal