rs29115131 SNP Detail

Summary

• ID
  rs29115131
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:128912281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGTCTTAA ACATACTGTT
  ATACAACTAC AAATATTCCA CACAATGCAC TACAATAACA GGTCACAATG TGCTATTAAA
  TTTCTGTGAG CATATTTGTT CTTCACATAT ACTTACATGT CTATAAATCC CCTAGATTTG
  ATATCAAATC CATGTCAAGA AATCAATATG TGAGATTTTT ATTTGTAAGA TTAAATACAG
  Y
  TAAAAATCAC TTAAAGTTTT AAACATTAAA AAAAGAAAAA ACATCTGTAC TTTTGAAATG
  TATTCATTTC CAAAGCAAGA TAATGACATT GGACACCAGA AAGAATAGAT AGTTATAGTA
  GAATGCTAGT GAATGTCTCT CTAAAGTTCA TCTACATTCC TGTTCTATGT TTACCTTATG
  TTTTCTTTTT ATTCTATTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38443393	NES09790695	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29115131					SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38443393	NES09790695	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:128912281 () rs orientation: forward

Symbol	Name	Function Class
Diaph2	diaphanous related formin 2	within coordinates
Rr6637	regulatory region 6637	1181 bp proximal