rs29125167 SNP Detail

Summary

• ID
  rs29125167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76627204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTC TCTCTGTTTC CATGGTATCT
  Y
  CCCTCTGATG TCCAGTTCAA AGGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38878696	mCV23367418	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss137906994	ENSMUSSNP22893	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29125167					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76627204 () rs orientation: forward

Symbol	Name	Function Class
Plekhg3	pleckstrin homology domain containing, family G (with RhoGef domain) member 3	mRNA-UTR
Rr468207	regulatory region 468207	1438 bp distal
Rr468208	regulatory region 468208	41 bp proximal
Sptb	spectrin beta, erythrocytic	58 bp downstream