rs29129321 SNP Detail

Summary

• ID
  rs29129321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107904779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT CTGTGTAGAT GTGTGTGTGT
  R
  TATATATGTA TCTGTGTCTG TGTAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38888234	mCV22713250	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss324151906	CHEV_12_109176730	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29129321					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107904779 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	190 bp downstream
Tssr117636	transcription start site region 117636	126 bp downstream
Tssr117637	transcription start site region 117637	152 bp downstream
Tssr117638	transcription start site region 117638	217 bp downstream
Tssr117639	transcription start site region 117639	232 bp downstream
Tssr117640	transcription start site region 117640	253 bp downstream
Tssr117641	transcription start site region 117641	273 bp downstream
Tssr117642	transcription start site region 117642	310 bp downstream
Tssr117643	transcription start site region 117643	428 bp downstream
Tssr117644	transcription start site region 117644	539 bp downstream
Tssr117645	transcription start site region 117645	570 bp downstream
Tssr117646	transcription start site region 117646	610 bp downstream
Tssr117647	transcription start site region 117647	626 bp downstream
Tssr117648	transcription start site region 117648	686 bp downstream
Tssr117649	transcription start site region 117649	712 bp downstream
Tssr117650	transcription start site region 117650	750 bp downstream