rs29129462 SNP Detail

Summary

• ID
  rs29129462
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:82290717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCA GTCTGGCGGT TCCTCAGAGA
  R
  TTGGACATGG TACTACCGGA AGATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss38892039	mCV23642036	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss137922546	ENSMUSSNP3039918	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29129462					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:82290717 () rs orientation: forward

Symbol	Name	Function Class
Rr403397	regulatory region 403397	1497 bp upstream
Sipa1l1	signal-induced proliferation-associated 1 like 1	within coordinates
Tssr114221	transcription start site region 114221	699 bp upstream
Tssr114222	transcription start site region 114222	1575 bp upstream
Tssr114223	transcription start site region 114223	1742 bp upstream
Tssr114224	transcription start site region 114224	1787 bp upstream
Tssr114225	transcription start site region 114225	1863 bp upstream
Tssr116943	transcription start site region 116943	1455 bp downstream