rs29130268 SNP Detail

Summary

• ID
  rs29130268
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:32113459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACATTTTT AAGTATCGTT
  CTCCAACATG GTTTTTTTTT TTTTGTTTTT TTTTTTTGTT TTTTTTTTTT TTTTTTAACA
  TCATAGATTT CTTATACAGG GTGTGCTAGA TGGCTCGCTT TCATTAGCCA CAATGCCAGG
  AGCTCCCCTT GTTTTAGAGC TGTAGAAGTG ACTCGGGCAT GAAATTAGTA ATTGGATTAA
  R
  TGACCTGTTG TTGGTCTCTC GTTCTGGGAG GTTTCCAAGA GAATAATACT AAGAGCAGAT
  ATGTTGGATT TAAACCATCT TGGCAATCAT CACTCTGGTA ATTTTTGTTT GCATCAAGTT
  TTAAGCCAAT AACCATGACC TGAAAAGGAA AAGCTTCATT CTCATGTTCC CGTTATGCTA
  CACTAGAACT GTTCTCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss38886115	mCV22596085	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss137572539	ENSMUSSNP3061763	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29130268					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:32113459 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4539	CpG island 4539	1852 bp distal
Gm51992	predicted gene, 51992	within coordinates
Gm60244	predicted gene, 60244	within coordinates