rs29133848 SNP Detail

Summary

• ID
  rs29133848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52655843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggcactgcc tggccttcag gggacctctc
  tgtaagaagc cagttttgct tccttttgca ccttcatctc aacattcctt tattctacat
  aattttaaaa gttctccttt gaattggctg tagcatatgt ttttattgtt ttctacatta
  Y
  ctaaaatctc tgatacacga tacacgtttc tctttttaat ccacagaaga ggcatggttt
  taATTAAAAA ATAGTTTTAT ATAAGTTTGG AGTTCTTCCA CTGAGTTTCC CAGTGGACTC
  ACCTAACAAA GCTAAGTATA TTTATAGTCC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38903992	mCV22548500	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss137738456	ENSMUSSNP5285788	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss324040186	CHEV_12_53710047	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29133848					SNP	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52655843 () rs orientation: forward

Symbol	Name	Function Class
Gm35239	predicted gene, 35239	within coordinates
Tssr113445	transcription start site region 113445	1417 bp downstream