rs29136193 SNP Detail

Summary

• ID
  rs29136193
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65206305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAAACTTATA ACAAACCAAC AACACACAAG AGTATAACAT AACTTAAATT GTAATTTTCC
  ACTTTCTTTT CTTGATGGTG TTGAATCTTT TGTTTGCTGG GTGTGGTGAT TTGAATATAA
  ATGACCCCCC CATACCCCTT TAGCTCATAT ATTTAAATGC TTAGTCACCA GGGAGTAGCA
  CTACTTGACA TGATTAGAAG GTATGGCCTT GTTGGAGGAA GTGTATCCCC AGGGGTGGTG
  GGCTTTAAGG TTTCAAAGCC TAGGCCAAGG CCAGTCTCTG TCTCTTGTTT CTCTGTCTCT
  S
  TGTGTGTATG TGTGTATGTG TGTGTGTGTG TCTGTCTGTC TGTCTGTCTG TCTGTCTGTC
  TCTGTCTGTC TGTCTCTCTC TGCCTGTGGA TCAGGATATA GATCTTAGCC ACTGCTTCAG
  AGCCTGCCTG AATGCCACCA TGCTTCCCCA CCATGGTGAT AATAGACTAT GCCTCTGAAC
  TATAAAAGCA TGCTCCCAAT TACACGCTTT CTTTTATAAG AGTTGCCATG ATCATGGTGT
  CATTTCACAG CAAAAGAACT GTTACTAAGA CACTAGAAAT GCTTGATGAC TCTAGAGGAA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38900098	mCV23638474	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	G
ss137832995	ENSMUSSNP3388729	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29136193					SNP	G	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65206305 () rs orientation: forward

Symbol	Name	Function Class
Mis18bp1	MIS18 binding protein 1	within coordinates
Tssr116466	transcription start site region 116466	326 bp upstream