rs29137690 SNP Detail

Summary

• ID
  rs29137690
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65205097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCCTTTC TATTTCAAAT
  GTTAATAATT CCTAAAAAGT TGAAATAAAA GTAGGAGCAA TGTCAGTGTT CATTTCTTCC
  AGGCATAAGT GAAGTTTAAA ACTAGCAATA GAGCAAGGTA AGAATTAACA ACTGAGTCAC
  CTTACTTTCA GCCTGACTGT TTTTTCACTA GGCTTAAGTG GCTACCATCA ATAATAAAAC
  R
  AGGAATAAAG CAAAAATAGA GTCTAAACCT CTGAGGAACA AAATAAATAC TTGCCTTAAA
  GGTCTTCCTA CCTGATATTT TTTTACTTCT TTTACAACAG TTTCAAGCTT TGTACATTTT
  CTTTGAGACC GGCCAGATAG TGTTAAATTA GGTCTTGGAC TTGAACGTTT AATTTTAGAT
  GTATTCTTTA TGGGATCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38907968	mCV23638737	ABI	CRAMUS_MOUSE	f	SNP	A	G					A		A
ss52441743	NES15414798	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	A	G		A	A	A	A		A	A	A	A		G
ss324072231	CHEV_12_66259310	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29137690					SNP	A	G	A	G	A	G	A	A	A	A	A	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52441743	NES15414798	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65205097 () rs orientation: forward

Symbol	Name	Function Class
Mis18bp1	MIS18 binding protein 1	within coordinates
Tssr116466	transcription start site region 116466	880 bp downstream