rs29137792 SNP Detail

Summary

• ID
  rs29137792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26495575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTACA GTTCAGAAAG CGCATCTGGG
  R
  AAAGCAAGGT AGAAATAAGT ATGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38911775	mCV24521339	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	A
ss137439018	ENSMUSSNP3508455	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29137792					SNP	G	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26495575 () rs orientation: forward

Symbol	Name	Function Class
Rr464136	regulatory region 464136	1187 bp distal
Rr464137	regulatory region 464137	799 bp proximal
Rsad2	radical S-adenosyl methionine domain containing 2	within coordinates
Tssr112998	transcription start site region 112998	1823 bp downstream
Tssr112999	transcription start site region 112999	1758 bp downstream
Tssr113000	transcription start site region 113000	1657 bp downstream
Tssr113001	transcription start site region 113001	1170 bp downstream
Tssr113002	transcription start site region 113002	1146 bp downstream
Tssr113003	transcription start site region 113003	1058 bp downstream
Tssr113004	transcription start site region 113004	1007 bp downstream
Tssr113005	transcription start site region 113005	998 bp downstream
Tssr113006	transcription start site region 113006	631 bp downstream
Tssr113007	transcription start site region 113007	541 bp downstream
Tssr113008	transcription start site region 113008	373 bp downstream
Tssr113009	transcription start site region 113009	358 bp downstream
Tssr113010	transcription start site region 113010	168 bp downstream
Tssr115906	transcription start site region 115906	1934 bp upstream
Tssr115907	transcription start site region 115907	1875 bp upstream
Tssr115908	transcription start site region 115908	1831 bp upstream
Tssr115909	transcription start site region 115909	1747 bp upstream
Tssr115910	transcription start site region 115910	1693 bp upstream
Tssr115911	transcription start site region 115911	1645 bp upstream
Tssr115912	transcription start site region 115912	1631 bp upstream
Tssr115913	transcription start site region 115913	1596 bp upstream
Tssr115914	transcription start site region 115914	1548 bp upstream
Tssr115915	transcription start site region 115915	1505 bp upstream
Tssr115916	transcription start site region 115916	1464 bp upstream
Tssr115917	transcription start site region 115917	1414 bp upstream
Tssr115918	transcription start site region 115918	1399 bp upstream
Tssr115919	transcription start site region 115919	1368 bp upstream
Tssr115920	transcription start site region 115920	1336 bp upstream
Tssr115921	transcription start site region 115921	960 bp upstream
Tssr115922	transcription start site region 115922	935 bp upstream
Tssr115923	transcription start site region 115923	842 bp upstream
Tssr115924	transcription start site region 115924	782 bp upstream
Tssr115925	transcription start site region 115925	767 bp upstream
Tssr115926	transcription start site region 115926	416 bp upstream
Tssr115927	transcription start site region 115927	375 bp upstream
Tssr115928	transcription start site region 115928	1596 bp downstream
Tssr115929	transcription start site region 115929	1626 bp downstream
Tssr115930	transcription start site region 115930	1902 bp downstream
Tssr115931	transcription start site region 115931	1940 bp downstream