rs29139404 SNP Detail

Summary

• ID
  rs29139404
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107902766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAATTTTTT TTCTTTATGT GACAAGACTC TAGCCCCTCT
  GTGTGTCAGG AGGTGTCGAG GGGCATTCCA GAAGGAAATG AAGACCTCGC GGGGGGGAGG
  S
  GGGGGGAGGA TCACCTGCAT ATCTAGTGAG CTTCTTCTGG TAACACAGAG AGGCCCAGCC
  GCTCTCACCC CCACCCAGCC CCACACACGG AATAGGATT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38907636	mCV22713228	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29139404					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107902766 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	285 bp upstream
Rr472389	regulatory region 472389	859 bp distal