rs29139621 SNP Detail

Summary

• ID
  rs29139621
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76721629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGA ATGAAAGCAG AGAACTGTTA
  M
  TCCTGACTTG TGGTAAGTAA CTTGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38912255	mCV23154864	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss137907675	ENSMUSSNP4652311	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29139621					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76721629 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	1660 bp proximal
Gm60317	predicted gene, 60317	1419 bp upstream
Rr468227	regulatory region 468227	295 bp distal
Rr468228	regulatory region 468228	within coordinates
Rr468229	regulatory region 468229	1608 bp proximal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	1441 bp upstream