rs29141008 SNP Detail

Summary

• ID
  rs29141008
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51741923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAGCTTG TACTCCACTC
  TGCCTTTGAG AACCAAGTAG CTACTTGTGA TTATCTAAGC ACTTTGTCTT GGTGACCTGT
  CATCTTCCCA CTGAAGAACT CAAGCAGGTT CATAAATACT ATTTTAGTTG TTGTTTTTCC
  TCATCTTAAA GGGTATGACA AGAATTCTTG TTTTCATGGC TGGGAGAACA AGTCACAACA
  M
  AGCTCTTGGT GACTTCAGCA AGTTCCATTG TATAATAGGA AGTGGTCCCC ACCCCTTCAT
  ATCAGTGAGC GTGTGTGCAT TGGGAAACAA GGAAATAAAA TCTCCCTTCA CAATTTGCCT
  ACTGTCCTTT GATTAGGCTC AGTATTCATC ATTAGCATGT TTGAAATTAT AGTAATTTCA
  GGTGATTCCA TTACTCTGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38914965	mCV24841412	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss137724512	ENSMUSSNP2767107	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss324037236	CHEV_12_52796127	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29141008					SNP	A	C	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51741923 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates
Rr256575	regulatory region 256575	278 bp proximal
Rr265419	regulatory region 265419	1922 bp distal