rs29141445 SNP Detail

Summary

• ID
  rs29141445
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112296929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATTCGGTGG TGCTGTCCAA ATGGGAGTGC TGATCAAAGG
  GATGCTAGCC CAGAGGCACA GTGAGGCCAA AAAAAACAAA AACAAAAAAA CAAACCAAAC
  Y
  AAACCAAACC AAAACAGAAG GACCGGGCTC ACAACACTCC TGCCTGACAA AAGACACATG
  CTCAGAATGA GAAACCCCAA ACGCAGCCTT TTCTTAAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38913301	mCV24927602	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss138716860	ENSMUSSNP3560465	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29141445					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112296929 () rs orientation: forward

Symbol	Name	Function Class
Gm29890	predicted gene, 29890	1317 bp downstream
Gm60261	predicted gene, 60261	within coordinates
Rr473423	regulatory region 473423	1301 bp distal
Rr473424	regulatory region 473424	within coordinates