rs29141868 SNP Detail

Summary

• ID
  rs29141868
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12423882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGC CCCCACTAGT CTGAGTACTT
  Y
  GGCAAATTCA CTTTTTGTCT CACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	PWD/PhJ	SM/J
ss38916176	mCV25315921	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss61349663	NES16962069	PERLEGEN	MM_PANEL2	f	SNP	C				C		T
ss137140960	ENSMUSSNP3355783	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss323899004	CHEV_12_12380687	CHEVERUD	SCREENING_POP	f	SNP						T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	PWD/PhJ	SM/J
rs29141868					SNP	C	C	T	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61349663	NES16962069	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12423882 () rs orientation: forward

Symbol	Name	Function Class
4921511I17Rik	RIKEN cDNA 4921511I17 gene	within coordinates
Cyria	CYFIP related Rac1 interactor A	within coordinates
Rr386868	regulatory region 386868	202 bp downstream