rs29142354 SNP Detail

Summary

• ID
  rs29142354
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110814414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGGCTGGA ATCAGAGGTG CACCGCTGCA CCACGCCTGG
  CCAGTATTAT TCAGCATTCA TTTTCTAATC CGGTCTTCTG GTAACCCATC TTTTGTCTGT
  Y
  AATTTGAAAT GTACACATCC TCCAATTCAA ATGATAAGGT TTTTTTCTCT CCAGCACAGT
  CAAGAGGTTG TTAAAACAGA GTCGATATTC TGGAAAATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38915614	mCV25034541	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss138693462	ENSMUSSNP4274798	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29142354					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110814414 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5126	CpG island 5126	1917 bp proximal
Rr473015	regulatory region 473015	1809 bp proximal