rs29142393 SNP Detail

Summary

• ID
  rs29142393
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112296251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCT GCCTCAGCTC AGTCAGAGAA
  M
  CCTGCTCTGG TTTGAAGGGC CCCTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38917410	mCV24927610	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	A
ss138716833	ENSMUSSNP2080494	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
ss324166908	CHEV_12_113568028	CHEVERUD	SCREENING_POP	f	SNP						C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29142393					SNP	C	C	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112296251 () rs orientation: forward

Symbol	Name	Function Class
Gm29890	predicted gene, 29890	1995 bp downstream
Gm60261	predicted gene, 60261	within coordinates
Rr473423	regulatory region 473423	623 bp distal
Rr473424	regulatory region 473424	within coordinates