rs29142849 SNP Detail

Summary

• ID
  rs29142849
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8412897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCTGGC ACAAAGACCA
  CAGGCTCATC TTCTCCCTGC CTCTGCTTAA AGAGAAGACA CATTTAGCCA AATTTACCAA
  CTAAAAAGAG AGTGCTGGCC AGTCTTTTAA CAACTTGACA CAGAAACTAG CATTATCTGA
  GAGGAGGGAT CCTCAATTGA GAAAATGTCT CCACAATATC CAGCTGTGGG GCTTTTTTTT
  W
  AATTAGTGAC TGATGGGGTA GGGCCTAGCC CATTGTGGGT GGTGCCATCC CTGGCTGGTG
  GTCCTGGGTG CTATAGGGAA GTACTCTGAG CAAACCATGG GGAGCAAGCC AGTAAGTAGC
  ACCCTTCCAT GGCTTCTGCA TCAGCTCCTG TCTCTAGGTT CCTGCCCTGG TTAAGTTGCC
  TCCCTAGTGC TATGATCAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38918760	mCV25296526	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss137108497	ENSMUSSNP5962248	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29142849					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8412897 () rs orientation: forward

Symbol	Name	Function Class
Gm33134	predicted gene, 33134	1041 bp upstream
Rr462572	regulatory region 462572	1127 bp proximal