rs29142900 SNP Detail

Summary

• ID
  rs29142900
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:36531784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGATATGCCA ACTTGTTTTT ACAGTGATCA TGTCTTTTTA CCCTCAACCA TGCAGACCCA
  TTTCCTTTTC TTTCTTTCTT TTTTTTTCTT TTCGAGAGCT GAGGAACCCA TGACCTTGTG
  TTTGCTATGC AAACACTCTA CCACTGAGCT ACATCCCCAA CCCCCCAGAC CCATTTTCTG
  AGCATGAGAG TTGATCATGT GTCAGAACGT GGTCCATGAG TCAAACTGTC TGAGGAGAGT
  TCTGAGGTTG TGAGCAAACT CCAAGTAAAA AGAGCAAAAG TCTTATAACC TCTGCTACTC
  Y
  GTAACATAGG TTTGTTCGTG GAATGTGCTT TCAAGCCCTC CTCAGGTGTA ATAATAGGAG
  TGGGTTTACT TTAGATTACC CATCAACTTT CCCACTATTA TTCAGAGTGT GGCTTCTAAG
  CACGAGTTGT CCTCCTGACT GTATATAGCC TGAGCTCCTG TGTCCTTGCC CTTGTGACAA
  CTTTATACAA CTTGAACTCA AGTGAACTTT GCTCACATGA CCTTGCTTAA CACTCAGAGT
  GCCTTTAGAA TATAAGTTGT TTGAGGCTCT GAATAAAAAT GGCTACTGCA TTAGACTTTA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss38919379	mCV22951310	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss137630548	ENSMUSSNP1700800	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29142900					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36531784 () rs orientation: forward

Symbol	Name	Function Class
Crppa	CDP-L-ribitol pyrophosphorylase A	Intron
Rr387069	regulatory region 387069	within coordinates
Rr465183	regulatory region 465183	1640 bp proximal