rs29145066 SNP Detail

Summary

• ID
  rs29145066
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:13476491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAACTCAT GTTTTCAGAG
  TCCTTTCCCA CGGCCTTAAG GGGCTGTCCA GAAGGTTATA TCATTTACCA TTTTGCTGAG
  GAACAACAGA CATACCCTTG CCTCCTAGAC TCATGCTGTT TCTAATTATA ATGGAGTCAT
  TAACCTTGGC ATGAGAGCTG GAGAGCTTGC CTGCCCCTTG CCAGCTGTGG CATTGGAAGA
  R
  CTAGCTGAGG CAGTGCTGGA GAGCTTGCCC TGGTGGTGTG GATGTGGGAG AGCTGGTGGG
  CTGGCCAACT CAGCTACCAC CCATGCCCAG ATCCAGGGCT TTAAATTGGT CCGTCCCAAC
  ATATACCCCA TCTAAGAACT ACTGGAGCAT TAACTCCGTG ACACAGGCAA CAACAGAATA
  TCTGAGATTA GTCCTGGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38919619	mCV24746066	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss137151060	ENSMUSSNP5427096	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss323902879	CHEV_12_13433296	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29145066					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:13476491 () rs orientation: forward

Symbol	Name	Function Class
Gm48309	predicted gene, 48309	773 bp upstream
Nbas	neuroblastoma amplified sequence	within coordinates
Rr386880	regulatory region 386880	156 bp downstream