rs29145251 SNP Detail

Summary

• ID
  rs29145251
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:108626130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCAGGCTTC CTGAAACCCC ACAGACCCAA TGATAGTATG
  AGACGGTGAT CCAGAGCATA GCTATCTTAC ACGCCTGTCC TCCATACTCA GAGAACAGAC
  R
  AGCGAGGTGA GCTACATATA GCCAACACAG GCAGCTCAAG AGGGACACAA ACTAGAAGCA
  GGGGACCCTT CTGTGCCCTA GCTGCCTGCA TCTGTTCTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38923625	mCV24944372	ABI	CRAMUS_MOUSE	f	SNP	G	G	A					G		A
ss51047099	NES14373288	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	G	G	G		G	A	G	G		G	G	G	G		G
ss138677514	ENSMUSSNP4306284	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A							A
ss324154908	CHEV_12_109898081	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29145251					SNP	G	G	A	G	G	G	G	G	G	A	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047099	NES14373288	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:108626130 () rs orientation: forward

Symbol	Name	Function Class
Evl	Ena-vasodilator stimulated phosphoprotein	within coordinates
Mir342	microRNA 342	1153 bp downstream
Tssr114995	transcription start site region 114995	1163 bp downstream