rs29145321 SNP Detail

Summary

• ID
  rs29145321
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26494276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGA ACTACAGGGG AGTTCAGTTT
  K
  TTGGACAGAA CAAAATTTTC CATGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss38923049	mCV24521351	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss137439000	ENSMUSSNP4908646	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29145321					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26494276 () rs orientation: forward

Symbol	Name	Function Class
Rr464136	regulatory region 464136	within coordinates
Rsad2	radical S-adenosyl methionine domain containing 2	within coordinates
Tssr112998	transcription start site region 112998	524 bp downstream
Tssr112999	transcription start site region 112999	459 bp downstream
Tssr113000	transcription start site region 113000	358 bp downstream
Tssr113001	transcription start site region 113001	109 bp upstream
Tssr113002	transcription start site region 113002	133 bp upstream
Tssr113003	transcription start site region 113003	208 bp upstream
Tssr113004	transcription start site region 113004	268 bp upstream
Tssr113005	transcription start site region 113005	294 bp upstream
Tssr113006	transcription start site region 113006	657 bp upstream
Tssr113007	transcription start site region 113007	741 bp upstream
Tssr113008	transcription start site region 113008	909 bp upstream
Tssr113009	transcription start site region 113009	927 bp upstream
Tssr113010	transcription start site region 113010	1077 bp upstream
Tssr115902	transcription start site region 115902	1407 bp upstream
Tssr115903	transcription start site region 115903	1077 bp upstream
Tssr115904	transcription start site region 115904	1053 bp upstream
Tssr115905	transcription start site region 115905	755 bp upstream
Tssr115906	transcription start site region 115906	635 bp upstream
Tssr115907	transcription start site region 115907	576 bp upstream
Tssr115908	transcription start site region 115908	532 bp upstream
Tssr115909	transcription start site region 115909	448 bp upstream
Tssr115910	transcription start site region 115910	394 bp upstream
Tssr115911	transcription start site region 115911	346 bp upstream
Tssr115912	transcription start site region 115912	332 bp upstream
Tssr115913	transcription start site region 115913	297 bp upstream
Tssr115914	transcription start site region 115914	249 bp upstream
Tssr115915	transcription start site region 115915	206 bp upstream
Tssr115916	transcription start site region 115916	165 bp upstream
Tssr115917	transcription start site region 115917	115 bp upstream
Tssr115918	transcription start site region 115918	100 bp upstream
Tssr115919	transcription start site region 115919	69 bp upstream
Tssr115920	transcription start site region 115920	37 bp upstream
Tssr115921	transcription start site region 115921	256 bp downstream
Tssr115922	transcription start site region 115922	352 bp downstream
Tssr115923	transcription start site region 115923	435 bp downstream
Tssr115924	transcription start site region 115924	506 bp downstream
Tssr115925	transcription start site region 115925	521 bp downstream
Tssr115926	transcription start site region 115926	870 bp downstream
Tssr115927	transcription start site region 115927	914 bp downstream