rs29145547 SNP Detail

Summary

• ID
  rs29145547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107091754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT AATAGGGACT CCCTGTGGGC
  R
  GGCGCCAGGC ATGCTGAAGA AGAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38917904	mCV22891493	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss138024999	ENSMUSSNP4700484	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss324146399	CHEV_12_108363705	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29145547					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107091754 () rs orientation: forward

Symbol	Name	Function Class
Gm16084	predicted gene 16084	within coordinates
Rr369596	regulatory region 369596	881 bp downstream
Rr369597	regulatory region 369597	689 bp upstream
Tssr114936	transcription start site region 114936	1039 bp downstream
Tssr117620	transcription start site region 117620	1775 bp upstream