rs29149317 SNP Detail

Summary

• ID
  rs29149317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73420627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGCTTGGT TTGAGGTGTG
  AGGTTTAAGC CCAGAGCCTC ATTCTAAACA AGCTCTATGC TACTGAGCTG CATCCCAGCT
  AGACATAAGA GACTTTAACT GAAGCATATT AGTAGGCACA TTAAATATGC ATACTTTAAC
  ACATTTGTTG GAGTGTACAA ATAAAGCAAT ATTACTCTTA TGTACTGTCT AGAAGAAACC
  R
  ACTTTCAATA TAAAGGTATA GATTGGCTTT TAAAAAATGA AGATATTCCA GGAAAACATA
  AGCCCAATGT AAGCTGGGGT GTCTACATTC ATATCAGACA GAGTAGATTT CATAATAAGA
  AATGTTATGG GGGAAAGACA CAGAATTCAG AGATAAAAGT TATATAAGAT GTTATAACTC
  CCTGGTGGTA TGCACCTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38931616	mCV24989778	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss137886669	ENSMUSSNP1057724	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss324098185	CHEV_12_74474840	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29149317					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73420627 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	774 bp proximal
Rr261220	regulatory region 261220	1974 bp proximal
Rr264130	regulatory region 264130	795 bp proximal