rs29149632 SNP Detail

Summary

• ID
  rs29149632
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98587236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAGAATTATA GACATTCCTA CTGTCTCTTG CTTTAAACAA TAAAATTAAG AAAAATCAAA
  TTATAGGTTG ACAATGATGG AGATTGTTTT TATGAGGACT TTTAGATCAT AGCCTAAGCT
  TACCCTGCCC TTGAAAGAGA AGCTCTCCTT CTGCCTTTAA CTATAACTGA AACAACCCAA
  CCCAAGAGTC ATTTCTTTTT TTTTTTAAAG ATTTATTTAT TTATTATATG TAAGTACACT
  GCAGCTGTCT TCAGACACTC CAGAAGAGGA CATCAGATCT TGTTACAGAT GGTTGTGAGC
  S
  ACCATGTGGT TGCTGGGATT TGAACTCTGG ACCTTCGGAA GAGAGCAGTC GGGTGCTCTT
  ACCCACTGAG CCATCTCACC AGCCCGCCAA GAGTCATTTC TTACAGTGCT TGCACCTTAC
  AGTCCCTGGG TAAGAGACCT GTGGGTTAAT ATTGCTTGCA CATTGCTGAT TTTTCTCACT
  CGGATGGCGC TTAAGCCTTT CCTAAAGCCC CCTCTAGTGA CAAGCAGAGA ATTAATCCAT
  TTCAGATCAA TACCCACACA CTTTAAACTT ACATTGTGTC CCTTGCCTTT TAAATGAATC
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss38932004	mCV24982143	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss137985979	ENSMUSSNP5537689	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29149632					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98587236 () rs orientation: forward

Symbol	Name	Function Class
Rr387680	regulatory region 387680	1785 bp upstream
Rr470931	regulatory region 470931	27 bp proximal