rs29150320 SNP Detail

Summary

• ID
  rs29150320
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:21423173 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GGTGT TTAGAGAGAG AAAAAGAGAT
  R
  GGCTTGTCTC TCAGTGAGGA GGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38934172	mCV23155894	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss137298172	ENSMUSSNP521023	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29150320					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:21423173 () rs orientation: reverse

Symbol	Name	Function Class
Adam17	a disintegrin and metallopeptidase domain 17	within coordinates
Cpgi4477	CpG island 4477	15 bp proximal
Gm49586	predicted gene, 49586	501 bp upstream
Rr463712	regulatory region 463712	246 bp proximal
Rr463713	regulatory region 463713	357 bp proximal
Rr463714	regulatory region 463714	371 bp proximal
Rr463715	regulatory region 463715	512 bp proximal
Rr463716	regulatory region 463716	551 bp proximal
Rr463717	regulatory region 463717	1039 bp proximal
Tssr112932	transcription start site region 112932	518 bp upstream
Tssr112933	transcription start site region 112933	1080 bp upstream
Tssr115856	transcription start site region 115856	309 bp downstream
Tssr115857	transcription start site region 115857	329 bp downstream
Tssr115858	transcription start site region 115858	354 bp downstream
Tssr115859	transcription start site region 115859	378 bp downstream
Tssr115860	transcription start site region 115860	434 bp downstream