rs29150937 SNP Detail

Summary

• ID
  rs29150937
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109708763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACC TACATGAAGC TGCCCGTGGC
  R
  TCTTTTCCCC GTATGACACA CTGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38935408	mCV24948047	ABI	CRAMUS_MOUSE	f	SNP	G	G	A				G		G
ss51052581	NES14374021	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	G	A		G	G	G		G	G	G		A
ss138683850	ENSMUSSNP273799	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						G
ss324156207	CHEV_12_110980539	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29150937					SNP	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51052581	NES14374021	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109708763 () rs orientation: forward

Symbol	Name	Function Class
Gm54371	predicted gene, 54371	829 bp downstream
Mir369	microRNA 369	1089 bp upstream
Mir377	microRNA 377	1752 bp downstream
Mir409	microRNA 409	829 bp upstream
Mir410	microRNA 410	1386 bp upstream
Mir412	microRNA 412	960 bp upstream
Mir541	microRNA 541	80 bp upstream
Mirc7	microRNA cluster 7, including Mir382 through Mir3072	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc46	microRNA cluster 46, including Mir409 through Mir410	829 bp proximal
Mirg	miRNA containing gene	within coordinates
Tssr115183	transcription start site region 115183	677 bp downstream
Tssr115184	transcription start site region 115184	1458 bp upstream
Tssr117762	transcription start site region 117762	707 bp upstream