rs29151746 SNP Detail

Summary

• ID
  rs29151746
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31883895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTTTCTT TCTTTCTTTC
  TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCTTTC
  TTTTTAAATT AGGTATTTTC TTCATTTACA TTTCAAATGC TATCCCAAAA GTCCCACATA
  CTCTCCCTCC CACCCCCCAC CCTCTCCCCT ACCTATCCAC TCCCACTTCT TGGCCCTGGC
  R
  TTCCCCTGTA CTGGGGCATA TAAAGTTTGC GTGTCCAATG GGCCTCTCTT TCCAGTGATG
  GCCGACTAGG CCATCTTTTG ATACATATGC AGCTAGAGTC AAGAGCTCCG GGGTACTGGT
  TAGTTCATAA TGTTGATCCA CCTATAGGGT TGCAGACCCC TTTAGCTCCT TGGGTACTTT
  CTCTAGCTCC TCCATTCGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38933644	mCV24461560	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss137570370	ENSMUSSNP1237537	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29151746					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31883895 () rs orientation: forward

Symbol	Name	Function Class
Cog5	component of oligomeric golgi complex 5	within coordinates
Rr387038	regulatory region 387038	1705 bp upstream