rs29151797 SNP Detail

Summary

• ID
  rs29151797
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70181850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAA CCAATAAGAT CATACAAAAG
  S
  GACTGCCCAA GTTTGTTTGA GCTGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38934628	mCV22299144	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	C
ss137862756	ENSMUSSNP4103406	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
ss324086841	CHEV_12_71236063	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29151797					SNP	G	G	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70181850 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	207 bp distal
Gm56526	predicted gene, 56526	12 bp downstream
Rr403332	regulatory region 403332	1288 bp upstream
Rr467201	regulatory region 467201	1019 bp proximal
Rr467202	regulatory region 467202	1213 bp proximal
Tssr116556	transcription start site region 116556	1185 bp downstream