rs29152783 SNP Detail

Summary

• ID
  rs29152783
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26495299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGA AAGAAAAATA AACAGACTGT
  R
  TTCTAATAAC AACAGTCCGT AGATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss38938582	mCV24521345	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss137439009	ENSMUSSNP774549	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29152783					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26495299 () rs orientation: forward

Symbol	Name	Function Class
Rr464136	regulatory region 464136	911 bp distal
Rr464137	regulatory region 464137	1075 bp proximal
Rsad2	radical S-adenosyl methionine domain containing 2	within coordinates
Tssr112998	transcription start site region 112998	1547 bp downstream
Tssr112999	transcription start site region 112999	1482 bp downstream
Tssr113000	transcription start site region 113000	1381 bp downstream
Tssr113001	transcription start site region 113001	894 bp downstream
Tssr113002	transcription start site region 113002	870 bp downstream
Tssr113003	transcription start site region 113003	782 bp downstream
Tssr113004	transcription start site region 113004	731 bp downstream
Tssr113005	transcription start site region 113005	722 bp downstream
Tssr113006	transcription start site region 113006	355 bp downstream
Tssr113007	transcription start site region 113007	265 bp downstream
Tssr113008	transcription start site region 113008	97 bp downstream
Tssr113009	transcription start site region 113009	82 bp downstream
Tssr113010	transcription start site region 113010	54 bp upstream
Tssr115905	transcription start site region 115905	1778 bp upstream
Tssr115906	transcription start site region 115906	1658 bp upstream
Tssr115907	transcription start site region 115907	1599 bp upstream
Tssr115908	transcription start site region 115908	1555 bp upstream
Tssr115909	transcription start site region 115909	1471 bp upstream
Tssr115910	transcription start site region 115910	1417 bp upstream
Tssr115911	transcription start site region 115911	1369 bp upstream
Tssr115912	transcription start site region 115912	1355 bp upstream
Tssr115913	transcription start site region 115913	1320 bp upstream
Tssr115914	transcription start site region 115914	1272 bp upstream
Tssr115915	transcription start site region 115915	1229 bp upstream
Tssr115916	transcription start site region 115916	1188 bp upstream
Tssr115917	transcription start site region 115917	1138 bp upstream
Tssr115918	transcription start site region 115918	1123 bp upstream
Tssr115919	transcription start site region 115919	1092 bp upstream
Tssr115920	transcription start site region 115920	1060 bp upstream
Tssr115921	transcription start site region 115921	684 bp upstream
Tssr115922	transcription start site region 115922	659 bp upstream
Tssr115923	transcription start site region 115923	566 bp upstream
Tssr115924	transcription start site region 115924	506 bp upstream
Tssr115925	transcription start site region 115925	491 bp upstream
Tssr115926	transcription start site region 115926	140 bp upstream
Tssr115927	transcription start site region 115927	99 bp upstream
Tssr115928	transcription start site region 115928	1872 bp downstream
Tssr115929	transcription start site region 115929	1902 bp downstream