rs29155013 SNP Detail

Summary

• ID
  rs29155013
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:36223123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGGCAGC CGCTCAGAAA
  GACTGGACAG AGTCTATGAA GTCTCCTTTA GGCTGTGACT GTGGAGCCAA CAGAAGTGAT
  GAAGAGAGAC TTCCAGAGAA GCTGGTTATA AAACTCCCCA GCAGTTTCAC AAAGAGCGAG
  AGCTGCCTCC CAGATGTGCA CAGCCTCGGT CTGAGTATGA ATATACCACG CAATGGAAGG
  Y
  GCTCCCTGAG ACGGAGAAGC AGCAGCAGCG GGTTCAAGTG GATCTCTACG AGGAGGCTCG
  CCGAGAAGCT AGGGATGGGG ACAGAATGCC ATAAACACCA GTTTTTGCTA ATGAGGCAGG
  GCTTGATGAG GCATCAAGAA GAGTTTTGGA GAATAGAGGC GCTGCATAAT GCAGAAATGA
  AAGCAGCTAG AACTCAGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss38944759	mCV24412555	ABI	CRAMUS_MOUSE	f	SNP		C	T					C		C
ss50978975	NES14410844	PERLEGEN	MM_PANEL2	f	SNP	C		T	C	T	T	T		C	C	C	C		C	C	C	C
ss137628201	ENSMUSSNP6321633	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T							C
ss324007695	CHEV_12_36899711	CHEVERUD	SCREENING_POP	f	SNP													C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs29155013					SNP	C	C	T	C	T	T	T	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50978975	NES14410844	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36223123 () rs orientation: forward

Symbol	Name	Function Class
Ankmy2	ankyrin repeat and MYND domain containing 2	within coordinates
Gm19046	predicted gene, 19046	within coordinates