rs29155198 SNP Detail

Summary

• ID
  rs29155198
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:30527441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC TGTATGGGTT TCATAAAATA
  R
  CATGCCTCAG GGAAATGTAT AGTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss38948940	mCV23336589	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss52363870	NES15389126	PERLEGEN	MM_PANEL2	f	SNP				A		G	G		A
ss323988624	CHEV_12_31162307	CHEVERUD	SCREENING_POP	f	SNP					A			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs29155198					SNP	A	A	G	A	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52363870	NES15389126	PERLEGEN	MM_PANEL	f	SNP	A/G
ss137553584	ENSMUSSNP2663587	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:30527441 () rs orientation: forward

Symbol	Name	Function Class
Gm28806	predicted gene 28806	1760 bp downstream
Tssr113087	transcription start site region 113087	1621 bp upstream