rs29155674 SNP Detail

Summary

• ID
  rs29155674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107905074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCA TTGTGTGTGC ATGTGCATGC
  R
  TGCATATATG TGTATATATG TGTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38945167	mCV22713261	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss324151908	CHEV_12_109177025	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29155674					SNP	G	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107905074 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	485 bp downstream
Tssr117636	transcription start site region 117636	153 bp upstream
Tssr117637	transcription start site region 117637	124 bp upstream
Tssr117638	transcription start site region 117638	66 bp upstream
Tssr117639	transcription start site region 117639	47 bp upstream
Tssr117640	transcription start site region 117640	31 bp upstream
Tssr117641	transcription start site region 117641	14 bp upstream
Tssr117642	transcription start site region 117642	15 bp downstream
Tssr117643	transcription start site region 117643	133 bp downstream
Tssr117644	transcription start site region 117644	244 bp downstream
Tssr117645	transcription start site region 117645	275 bp downstream
Tssr117646	transcription start site region 117646	315 bp downstream
Tssr117647	transcription start site region 117647	331 bp downstream
Tssr117648	transcription start site region 117648	391 bp downstream
Tssr117649	transcription start site region 117649	417 bp downstream
Tssr117650	transcription start site region 117650	455 bp downstream