rs29156464 SNP Detail

Summary

• ID
  rs29156464
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69277080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACCCTGT CTGAACTGAA
  TCGAGGTAGA CGACAAGGAA AGACTCCAGT GTGTCCTCTG ACCTCCACAT GTATGCTGTA
  CTGGCACATA CAACACACAT ACACACACAC ACACACACAC ACACACACTT AAAAAGATTA
  AACTTAGCCG GGCGGTGGTA TACACACCTT TAATTCCAGC ACTCGGGAGG CAGAGGCAGG
  Y
  GGATTTCTGA ATTCGAGGCT AGCCTGGTCT ACAAAGTGAG TTCCAGGACA GCCAAGGCTA
  TACAGAGAAA CCCTGTCTCA AAAAGCCAAA AAAAAAAAAA AAAGATTAAA CTTGTCCTGG
  GTGGCGATTA TGCCCCGCTC TCTCGGGGGT ATAGTATATG CATTTCTCCA CTGCAAGAGT
  ATGTCCTGGG TGAGCATATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	MSM/Ms
ss38941456	mCV22784773	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss137856426	ENSMUSSNP168176	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	MSM/Ms
rs29156464					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69277080 () rs orientation: forward

Symbol	Name	Function Class
Gm47545	predicted gene, 47545	within coordinates
Rr403319	regulatory region 403319	1992 bp downstream
Rr467013	regulatory region 467013	1663 bp distal
Rr467015	regulatory region 467015	779 bp distal
Rr467016	regulatory region 467016	872 bp distal
Tssr113624	transcription start site region 113624	1665 bp downstream