rs29156844 SNP Detail

Summary

• ID
  rs29156844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:101045269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCATGACAG TGTAATTCCA GGTCTAAGGG TCTTCTGACC
  TTCAACAGAA CCAGAACATA CATGCAAACA CACACACACA CACACACACA CACACACACA
  Y
  AAGTATAATT TTTCAAAAAA AAAAAAAAGC CTACATTGTC CTCAATGGAG GGGAAAAAAA
  AAGAATTCTC AATTATATGT AACAAAATAG AGAGCAGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss38949795	mCV23332002	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29156844					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:101045269 () rs orientation: forward

Symbol	Name	Function Class
Ppp4r3a	protein phosphatase 4 regulatory subunit 3A	within coordinates
Rr254052	regulatory region 254052	932 bp proximal
Rr258865	regulatory region 258865	1469 bp distal
Rr264939	regulatory region 264939	1331 bp proximal
Rr265846	regulatory region 265846	1870 bp distal