rs29158722 SNP Detail

Summary

• ID
  rs29158722
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:99553082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAAA TTAAGGTCCT TCAGAACTGG
  S
  TCTTTATCTT ACCTACCTCC ATGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss38950555	mCV24980224	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss47234306	NES11413554	PERLEGEN	MM_PANEL2	f	SNP			C	G		C	G
ss137990984	ENSMUSSNP2543278	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
ss324135512	CHEV_12_100825033	CHEVERUD	SCREENING_POP	f	SNP					C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs29158722					SNP	G	G	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47234306	NES11413554	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:99553082 () rs orientation: forward

Symbol	Name	Function Class
Gm26839	predicted gene, 26839	within coordinates
Gm53755	predicted gene, 53755	within coordinates
Rr269924	regulatory region 269924	443 bp proximal