rs29159415 SNP Detail

Summary

• ID
  rs29159415
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76721397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCGT GAAAATTATT TATTAGATAT
  K
  GTCAGACATT GGGGCCAATA TTGAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss38956344	mCV23154865	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss137907672	ENSMUSSNP3354256	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs29159415					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76721397 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	1892 bp proximal
Gm60317	predicted gene, 60317	1651 bp upstream
Rr468227	regulatory region 468227	63 bp distal
Rr468228	regulatory region 468228	77 bp proximal
Rr468229	regulatory region 468229	1840 bp proximal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	1673 bp upstream