rs29160611 SNP Detail

Summary

• ID
  rs29160611
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:46868639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGGAGATG ATACAGAGGC
  CATGGAGAGG TGCTGCTTAC AAACTTACTT CTCATGGCTT GCTCAGCCTG CTTTCTTATA
  GGACCCAGGA CCACTAGTCC AGAGATGGCA CCACCTACAA TAGGCTGTCC CCTTCCCACT
  GATCACTAAT TAAAAAAATA CCAGACAGCC TGATCTTATG GGGGGGGGGG GCATTTTCTC
  R
  GTTGAGGCAC CCTCCTTTCT GATGACTCTA GCTTGCGTCA AGGGGACATA AAACTAGCCA
  GTACAGCACT TATAAAAGTA GAGCCACATT GTATTGTTAT GAGAGTCACT TATTGCTCTC
  TTTGGGTTTA TTATGTGTTG TCTGTCACTC AGTAGAGACC AGTCACACAA GATGAGATTT
  CAAATAAGGA GAGTGAGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38955014	mCV24792157	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss137691509	ENSMUSSNP2085150	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss324025090	CHEV_12_47922843	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29160611					SNP	G	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:46868639 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4580	CpG island 4580	1844 bp distal
Gm60470	predicted gene, 60470	within coordinates
Rr465711	regulatory region 465711	1219 bp distal